Friday, December 8th, 2023
10:00 am PST
Location: Y2E2 111
Deep learning on local sites for protein structure and function analysis
Understanding how the three-dimensional structure of a protein leads to its function is important for determining disease mechanisms,
12/7/23
Speaker: Kyle Daniels, Assistant Professor of Genetics, Stanford University
Title: Decoding the language of signaling domains to control cell function
Abstract: Cell therapies are powerful technologies in which human cells are reprogrammed for therapeutic applications such as killing cancer cells or replacing defective cells.
Mark Musen, Professor of Biomedical Data Science and Director of the Stanford Center for Biomedical Informatics Research, received the degree of Doctor honoris causa from the University of Fribourg (Switzerland) in a ceremony on November 15,
Date: 11/30/23
Speaker: Jean Fan, Assistant Professor of Biomedical Engineering at Johns Hopkins University
Title: Computational Methods for Comparative Spatial Omics Analysis
Abstract: Mammalian tissues are comprised of many molecularly and functionally distinct cell-types and cell-states organized into meso-scale structures and patterns to achieve intricate biological functions.
DATE: Wednesday, 29 November 2023
TIME: 3:00–4:30 PM
LOCATION: Conference Room X399,
Population biobanks are a valuable resource for identifying genetic and environmental factors that contribute to disease.
Kevin Wu
Wednesday, November 8th, 2023
2:00 pm – 3:00 pm PST
CCSR 0235
Zoom Link: https://stanford.zoom.us/j/95984592133?pwd=MDRXcyt4eTlCVlZhdHZYZ0prLzBGZz09
Title: Medical AI After Deployment: Data-driven analyses and methods for clinically viable AI
Abstract: Medical AI algorithms have undergone significant development and regulatory approval,
Work type: University Tenure Line
Location: Stanford University
Categories: School of Medicine
The Department of Biomedical Data Science (DBDS) at Stanford University seeks two faculty members to join the Department as Assistant Professors on the University Tenure Line.
The DBDS administration is a team-first organization that is interdependent on its members to meet the demands of all faculty and students.
The COVID-19 pandemic has taken a devastating toll around the world. Since January 2020, the World Health Organization estimates 14.9 million excess deaths have occurred globally.
The scholars in the 2023 cohort come from 29 countries, including the first scholars from Hungary, Malawi, the Netherlands, Russia,
Date: 10/12/23
Speaker: Irene Chen
Title: Beyond Bias: Constructing an Ethical Framework for AI in Medicine
Host: Weiruo Zhang
Click here for more information
DATE: Wednesday, 11 October 2023
TIME: 3:00–4:30 PM
TITLE: A Novel Chest Computed Tomography Scoring System in Children and Adolescents with Rheumatologic Diffuse Lung Disease
LOCATION: Conference Room X399,
TITLE: Clinical Trial Design for Glaucoma Treatment Using Humphrey Visual Field as Primary OutcomeA Guide for the Statistically Perplexed
DATE: Wednesday,
Gina Bouchard: Computational frameworks to quantify and compare microenvironment spatial features of in vitro patient-derived models and clinical specimens are needed.
Exciting work in glioblastoma research spearheaded by postdoc Yuan-Ning Zheng. The Gevaert team has developed a deep learning model to predict transcriptional subtypes of glioblastoma cells from spatial transcriptomics data and histology images.
Dear Faculty, Trainees and Staff,
On September 1, 2023, the Biomedical Informatics (BMI) training program will finalize its last step in merging with the Department of Biomedical Data Science (DBDS) and formally change its name to the Biomedical Data Science training program.
In collaboration with Hastie and Tibshirani labs, Rivas lab members, including a recent alumnus of the DBDS program and first author Yosuke Tanigawa,
We are delighted to announce that DBDS faculty researcher Daniel Rubin has been invited to participate in cohort 5 of the Stanford Medicine Leadership Academy (SMLA).
![“90 Seconds with Lisa Kim”: Genome sequencing sets Guinness World Record [featuring Euan Ashley]](https://dbds.stanford.edu/wp-content/uploads/2023/06/Screen-Shot-2022-02-28-at-2.34.29-PM.jpg)
A new ultra-rapid genome sequencing approach developed by Stanford Medicine scientists sets the first Guinness World Record for the fastest DNA sequencing technique,
A new report from the World Economic Forum calls for third-party data protection. This approach would respect individual rights and benefit companies and society.
DBDS researchers Ruishan Liu (first author, pictured here), Ying Lu, James Zou and colleagues have been named recipients of a 2022 Top Ten Clinical Research Achievement Award,
DBDS Professor Nigam Shah assesses the state of AI in healthcare and encourages executives to think beyond the model.
Ying Lu [pictured here], together with visiting scholar Ruben van Eijk and Tze Lai and Lu Tian of the Department of Biomedical Data Science and the Center for Innovative Study Design,
DBDS faculty researcher Suzanne Tamang [pictured here] and her colleagues from Oak Ridge National Laboratory’s Department of Energy published a research article in PLoS One on using clinical notes in combination with structured data for the prediction of ICU outcomes.
DBDS faculty researcher Nima Aghaeepour and colleagues “have led a national study showing that a blood-based test they developed can predict which patients are at higher risk of surgical complications,
DBDS faculty researcher Teri Klein is one of “Nine researchers from Stanford University and the SLAC National Accelerator Laboratory [who] have been named Fellows of the American Association for the Advancement of Science (AAAS).
“AI can reveal remarkable medical insights, but only if patients and doctors have faith in it. Thus, trust has become AI’s singular goal,
“While the pandemic brought out the best in many people — including those who delivered food to elderly neighbors, sewed masks and risked their lives to care for afflicted patients —
The Cambridge Center for AI in Medicine and Director Mihaela van der Schaar hosted a special seminar by DBDS Chair Sylvia Plevritis.
“Checkpoint inhibition has revolutionized oncology, but unfortunately many patients given the strongest forms of this cancer therapy will experience severe side effects,” said Aaron Newman,
“A research effort led by Stanford scientists [including DBDS faculty researcher Euan Ashley] set the first Guinness World Record for the fastest DNA sequencing technique,
DBDS faculty researchers Aaron Newman, Serena Yeung, and James Zou have been selected to join the second cohort of scientists to be named Chan Zuckerberg Biohub Investigators following a competition for individual awards.
DBDS faculty researcher Julia Palacios has been selected to receive a National Science Foundation (NSF) Career Award for support of the project entitled “CAREER: New Statistical Approaches for Studying Evolutionary Processes: Inference,
